STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ93347.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (236 aa)    
Predicted Functional Partners:
mshD
Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
    
 0.882
SDQ39428.1
Two-component system, OmpR family, sensor kinase.
 
 
 0.723
SDQ25415.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
     0.699
SDQ49071.1
Two-component system, OmpR family, sensor kinase.
 
 
 0.696
SDQ51196.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 
 
 0.663
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.627
SDQ28186.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.623
SDQ29377.1
Signal transduction histidine kinase.
 
 
 0.623
SDR00078.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 
 0.619
SDQ25315.1
GAF domain-containing protein.
 
 
 0.600
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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