STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ99369.1DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. (1122 aa)    
Predicted Functional Partners:
SDQ99347.1
Superfamily I DNA or RNA helicase.
  
 0.981
SDQ99438.1
ATP-dependent DNA helicase, Rep family.
 
 
0.960
SDQ99329.1
Hypothetical protein; Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain.
 
     0.817
SDQ03514.1
Conjugative relaxase domain-containing protein, TrwC/TraI family.
  
 
 0.648
SDQ68246.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
 
 0.648
SDR29374.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
 
 0.648
SDQ99899.1
Hypothetical protein.
 
     0.641
SDQ51451.1
DNA polymerase-3 subunit delta'.
 
   
 0.638
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 
   
 0.633
SDQ99307.1
DNA polymerase-3 subunit epsilon.
  
  
 0.630
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.