STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR02423.1ABC-2 type transport system ATP-binding protein. (287 aa)    
Predicted Functional Partners:
SDR02438.1
ABC-2 type transport system permease protein.
 
  
 0.967
SDQ33674.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
     
0.869
SDQ81769.1
NitT/TauT family transport system ATP-binding protein.
 
    
0.764
SDQ50379.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
    
0.665
SDR02382.1
Putative thioredoxin.
     
 0.639
SDQ81940.1
ABC-2 type transport system permease protein.
  
 
 0.635
SDR02459.1
Protein of unknown function.
 
     0.625
SDR02403.1
2,4-dienoyl-CoA reductase.
     
 0.622
SDQ31250.1
ABC-2 type transport system permease protein.
  
 0.533
SDR02362.1
Hypothetical protein.
       0.493
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.