STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR02813.1ADP-ribosylglycohydrolase. (350 aa)    
Predicted Functional Partners:
SDQ52658.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
    
 0.900
SDR02794.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.685
SDQ39310.1
Hypothetical protein.
   
 
 0.524
SDR08328.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
   
 
 0.524
SDR29467.1
Hypothetical protein.
   
 
 0.524
SDR30751.1
Hypothetical protein.
   
 
 0.524
SDR02831.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.519
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.465
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.