STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR04998.1Cytochrome c-type biogenesis protein CcsB. (339 aa)    
Predicted Functional Partners:
SDR05016.1
Cytochrome c biogenesis protein.
  
 0.974
SDQ03274.1
Cytochrome c biogenesis protein.
  
 0.890
SDQ89753.1
Cytochrome c biogenesis protein.
  
 0.888
SDR05059.1
Cytochrome c-type biogenesis protein.
 
  
 0.849
SDR05037.1
Thiol-disulfide isomerase or thioredoxin.
 
  
 0.834
SDR04974.1
Hypothetical protein.
       0.741
SDR04954.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
     
 0.650
SDQ03150.1
Thiol-disulfide isomerase or thioredoxin.
 
  
 0.646
SDQ89724.1
Cytochrome c-type biogenesis protein.
 
  
 0.633
SDR12877.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
  
  
 0.631
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.