STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR07405.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (244 aa)    
Predicted Functional Partners:
SDR07424.1
Signal transduction histidine kinase.
 
 0.964
SDR07526.1
Signal transduction histidine kinase.
 
 0.876
SDQ34586.1
Signal transduction histidine kinase.
 
 0.849
SDQ33238.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.848
SDQ70722.1
Signal transduction histidine kinase.
 
 0.848
SDQ70458.1
Signal transduction histidine kinase.
 
 0.846
SDQ45187.1
Signal transduction histidine kinase.
 
 
 0.841
SDQ26044.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.831
SDR07391.1
Putative ABC transport system ATP-binding protein.
   
   0.546
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
       0.538
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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