STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR09902.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
SDR09885.1
acyl-CoA thioester hydrolase.
  
    0.756
SDR16705.1
Alpha/beta hydrolase family protein.
  
     0.740
SDR19426.1
SseB protein N-terminal domain-containing protein.
  
     0.686
SDR16283.1
Hypothetical protein.
  
     0.657
SDQ98426.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.646
SDR09865.1
acyl-CoA thioesterase-2.
       0.637
SDQ97122.1
Cytochrome oxidase assembly protein ShyY1.
  
     0.597
crgA
Uncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
  
     0.586
SDQ35158.1
PKD domain-containing protein.
  
     0.575
SDQ97190.1
Protein of unknown function.
  
     0.571
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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