STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR09941.1Uncharacterized conserved protein YndB, AHSA1/START domain. (147 aa)    
Predicted Functional Partners:
SDQ84305.1
Catechol 2,3-dioxygenase.
  
     0.639
SDQ45163.1
Hypothetical protein.
  
     0.583
SDQ38447.1
Catechol 2,3-dioxygenase.
  
     0.564
SDR09920.1
Hemoglobin.
       0.524
SDQ90061.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
     0.493
SDR04849.1
Polysaccharide deacetylase.
  
     0.486
SDQ51562.1
Dihydrofolate reductase.
 
     0.462
SDQ03223.1
Polysaccharide deacetylase.
  
     0.451
SDQ31970.1
Polysaccharide deacetylase.
  
     0.449
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.