STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR13961.1Taurine dioxygenase, alpha-ketoglutarate-dependent. (330 aa)    
Predicted Functional Partners:
SDR13982.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.996
SDR13944.1
Ornithine cyclodeaminase.
 
    0.913
SDQ03333.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 0.906
SDQ67300.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 0.903
SDR14002.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
 
  
 0.902
SDR05389.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 0.882
SDR13882.1
Long-chain-fatty-acid---luciferin-component ligase.
 
     0.809
SDR14019.1
Cysteine synthase A.
 
   
 0.748
SDQ77138.1
fatty-acyl-CoA synthase.
 
  
 0.589
SDQ71968.1
fatty-acyl-CoA synthase.
 
  
 0.534
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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