STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR21214.1DNA-binding transcriptional regulator, IclR family. (235 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
    
 0.865
SDQ69559.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.694
SDQ72016.1
DNA-binding transcriptional regulator, IclR family.
  
     0.686
SDR29290.1
DNA-binding transcriptional regulator, IclR family.
  
     0.666
SDR21172.1
Formiminoglutamate deiminase.
 
     0.656
SDQ48045.1
DNA-binding transcriptional regulator, IclR family.
  
     0.610
SDQ54781.1
Transcriptional regulator, IclR family.
  
     0.598
SDQ79747.1
DNA-binding transcriptional regulator, IclR family.
  
     0.590
hutI
Imidazolonepropionase.
 
     0.566
SDQ82882.1
DNA-binding transcriptional regulator, IclR family.
  
     0.557
Your Current Organism:
Arthrobacter crystallopoietes
NCBI taxonomy Id: 37928
Other names: A. crystallopoietes, ATCC 15481, CIP 102717, DSM 20117, IFO 14235, JCM 2522, LMG 3819, LMG:3819, NBRC 14235
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