STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM44930.12-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase. (265 aa)    
Predicted Functional Partners:
SFM44820.1
4-hydroxy-2-oxovalerate aldolase.
 
 
 0.978
SFM44845.1
Acetaldehyde dehydrogenase.
 
  
 0.963
SFM44901.1
4-oxalocrotonate decarboxylase.
 
  
 
0.945
SFN24327.1
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
 
 0.917
SFM80572.1
4-hydroxy-2-oxoheptanedioate aldolase.
 
 0.878
SFN24351.1
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
 0.864
SFM44789.1
Catechol 2,3-dioxygenase.
 
   
 0.861
SFM44871.1
4-oxalocrotonate tautomerase.
    
 0.853
SFM44989.1
Catechol 2,3-dioxygenase.
 
   
 0.827
SFM44958.1
2-hydroxymuconate semialdehyde dehydrogenase.
 
    0.822
Your Current Organism:
Marinobacter pelagius
NCBI taxonomy Id: 379482
Other names: CGMCC 1.6775, JCM 14804, M. pelagius, Marinobacter pelagius Xu et al. 2008, Marinobacter sp. HS225, strain HS225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.