Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM50233.1 | SFM50273.1 | SAMN04487961_0496 | SAMN04487961_0498 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Hypothetical protein. | 0.404 |
SFM50273.1 | SFM50233.1 | SAMN04487961_0498 | SAMN04487961_0496 | Hypothetical protein. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.404 |
SFM50273.1 | SFM50299.1 | SAMN04487961_0498 | SAMN04487961_0499 | Hypothetical protein. | Protein of unknown function. | 0.598 |
SFM50273.1 | SFM50331.1 | SAMN04487961_0498 | SAMN04487961_0500 | Hypothetical protein. | Protein of unknown function. | 0.427 |
SFM50273.1 | SFN07188.1 | SAMN04487961_0498 | SAMN04487961_2033 | Hypothetical protein. | CAAX protease self-immunity. | 0.405 |
SFM50273.1 | SFN19869.1 | SAMN04487961_0498 | SAMN04487961_2442 | Hypothetical protein. | Hypothetical protein. | 0.432 |
SFM50299.1 | SFM50273.1 | SAMN04487961_0499 | SAMN04487961_0498 | Protein of unknown function. | Hypothetical protein. | 0.598 |
SFM50299.1 | SFM50331.1 | SAMN04487961_0499 | SAMN04487961_0500 | Protein of unknown function. | Protein of unknown function. | 0.537 |
SFM50331.1 | SFM50273.1 | SAMN04487961_0500 | SAMN04487961_0498 | Protein of unknown function. | Hypothetical protein. | 0.427 |
SFM50331.1 | SFM50299.1 | SAMN04487961_0500 | SAMN04487961_0499 | Protein of unknown function. | Protein of unknown function. | 0.537 |
SFN07188.1 | SFM50273.1 | SAMN04487961_2033 | SAMN04487961_0498 | CAAX protease self-immunity. | Hypothetical protein. | 0.405 |
SFN19869.1 | SFM50273.1 | SAMN04487961_2442 | SAMN04487961_0498 | Hypothetical protein. | Hypothetical protein. | 0.432 |