node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM53185.1 | SFM53288.1 | SAMN04487961_0597 | SAMN04487961_0601 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Protein of unknown function. | 0.426 |
SFM53185.1 | recB | SAMN04487961_0597 | SAMN04487961_0599 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...] | 0.669 |
SFM53185.1 | recC | SAMN04487961_0597 | SAMN04487961_0600 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...] | 0.668 |
SFM53185.1 | recD | SAMN04487961_0597 | SAMN04487961_0598 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...] | 0.668 |
SFM53288.1 | SFM53185.1 | SAMN04487961_0601 | SAMN04487961_0597 | Protein of unknown function. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.426 |
SFM53288.1 | SFM53320.1 | SAMN04487961_0601 | SAMN04487961_0602 | Protein of unknown function. | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.558 |
SFM53288.1 | SFM53348.1 | SAMN04487961_0601 | SAMN04487961_0603 | Protein of unknown function. | DNA excision repair protein ERCC-2. | 0.558 |
SFM53288.1 | SFM94967.1 | SAMN04487961_0601 | SAMN04487961_1676 | Protein of unknown function. | Hypothetical protein. | 0.433 |
SFM53288.1 | recB | SAMN04487961_0601 | SAMN04487961_0599 | Protein of unknown function. | DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...] | 0.483 |
SFM53288.1 | recC | SAMN04487961_0601 | SAMN04487961_0600 | Protein of unknown function. | DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...] | 0.483 |
SFM53288.1 | recD | SAMN04487961_0601 | SAMN04487961_0598 | Protein of unknown function. | DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...] | 0.483 |
SFM53320.1 | SFM53288.1 | SAMN04487961_0602 | SAMN04487961_0601 | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Protein of unknown function. | 0.558 |
SFM53320.1 | SFM53348.1 | SAMN04487961_0602 | SAMN04487961_0603 | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | DNA excision repair protein ERCC-2. | 0.923 |
SFM53348.1 | SFM53288.1 | SAMN04487961_0603 | SAMN04487961_0601 | DNA excision repair protein ERCC-2. | Protein of unknown function. | 0.558 |
SFM53348.1 | SFM53320.1 | SAMN04487961_0603 | SAMN04487961_0602 | DNA excision repair protein ERCC-2. | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.923 |
SFM53348.1 | recC | SAMN04487961_0603 | SAMN04487961_0600 | DNA excision repair protein ERCC-2. | DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...] | 0.408 |
SFM53348.1 | recD | SAMN04487961_0603 | SAMN04487961_0598 | DNA excision repair protein ERCC-2. | DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...] | 0.807 |
SFM94967.1 | SFM53288.1 | SAMN04487961_1676 | SAMN04487961_0601 | Hypothetical protein. | Protein of unknown function. | 0.433 |
recB | SFM53185.1 | SAMN04487961_0599 | SAMN04487961_0597 | DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...] | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.669 |
recB | SFM53288.1 | SAMN04487961_0599 | SAMN04487961_0601 | DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...] | Protein of unknown function. | 0.483 |