Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM39221.1 | SFM48307.1 | SAMN04487961_0110 | SAMN04487961_0425 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.984 |
SFM39221.1 | SFM55622.1 | SAMN04487961_0110 | SAMN04487961_0681 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.998 |
SFM39221.1 | SFM57775.1 | SAMN04487961_0110 | SAMN04487961_0764 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
SFM39221.1 | SFM57827.1 | SAMN04487961_0110 | SAMN04487961_0766 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.997 |
SFM39221.1 | SFM59124.1 | SAMN04487961_0110 | SAMN04487961_0815 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.957 |
SFM39221.1 | SFN11803.1 | SAMN04487961_0110 | SAMN04487961_2213 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Na+/proline symporter. | 0.999 |
SFM39221.1 | SFN27937.1 | SAMN04487961_0110 | SAMN04487961_2684 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.980 |
SFM39221.1 | SFN32407.1 | SAMN04487961_0110 | SAMN04487961_2769 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.994 |
SFM39221.1 | SFN32791.1 | SAMN04487961_0110 | SAMN04487961_2786 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.999 |
SFM39221.1 | SFN32968.1 | SAMN04487961_0110 | SAMN04487961_2794 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.989 |
SFM48307.1 | SFM39221.1 | SAMN04487961_0425 | SAMN04487961_0110 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.984 |
SFM48307.1 | SFM55622.1 | SAMN04487961_0425 | SAMN04487961_0681 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein. | 0.997 |
SFM48307.1 | SFM57775.1 | SAMN04487961_0425 | SAMN04487961_0764 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.992 |
SFM48307.1 | SFM57827.1 | SAMN04487961_0425 | SAMN04487961_0766 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein. | 0.999 |
SFM48307.1 | SFM59124.1 | SAMN04487961_0425 | SAMN04487961_0815 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.964 |
SFM48307.1 | SFN11803.1 | SAMN04487961_0425 | SAMN04487961_2213 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | Na+/proline symporter. | 0.998 |
SFM48307.1 | SFN27937.1 | SAMN04487961_0425 | SAMN04487961_2684 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein. | 0.999 |
SFM48307.1 | SFN32407.1 | SAMN04487961_0425 | SAMN04487961_2769 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.996 |
SFM48307.1 | SFN32791.1 | SAMN04487961_0425 | SAMN04487961_2786 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | Two-component system, NarL family, sensor histidine kinase BarA. | 0.998 |
SFM48307.1 | SFN32968.1 | SAMN04487961_0425 | SAMN04487961_2794 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.961 |
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