Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM49188.1 | SFM58626.1 | SAMN04487961_0457 | SAMN04487961_0795 | Cystathione beta-lyase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.831 |
SFM49188.1 | SFN15028.1 | SAMN04487961_0457 | SAMN04487961_2231 | Cystathione beta-lyase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.452 |
SFM49188.1 | SFN33302.1 | SAMN04487961_0457 | SAMN04487961_2809 | Cystathione beta-lyase. | Homoserine dehydrogenase. | 0.874 |
SFM49188.1 | SFN35182.1 | SAMN04487961_0457 | SAMN04487961_2873 | Cystathione beta-lyase. | O-acetylhomoserine sulfhydrylase. | 0.956 |
SFM49188.1 | SFN47852.1 | SAMN04487961_0457 | SAMN04487961_3169 | Cystathione beta-lyase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.959 |
SFM49188.1 | metE | SAMN04487961_0457 | SAMN04487961_3076 | Cystathione beta-lyase. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.912 |
SFM49188.1 | metXS | SAMN04487961_0457 | SAMN04487961_0073 | Cystathione beta-lyase. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. | 0.418 |
SFM49188.1 | metZ | SAMN04487961_0457 | SAMN04487961_0849 | Cystathione beta-lyase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.964 |
SFM58626.1 | SFM49188.1 | SAMN04487961_0795 | SAMN04487961_0457 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cystathione beta-lyase. | 0.831 |
SFM58626.1 | SFN15028.1 | SAMN04487961_0795 | SAMN04487961_2231 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.589 |
SFM58626.1 | SFN33302.1 | SAMN04487961_0795 | SAMN04487961_2809 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Homoserine dehydrogenase. | 0.520 |
SFM58626.1 | SFN35182.1 | SAMN04487961_0795 | SAMN04487961_2873 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | O-acetylhomoserine sulfhydrylase. | 0.943 |
SFM58626.1 | SFN47771.1 | SAMN04487961_0795 | SAMN04487961_3166 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.975 |
SFM58626.1 | SFN47852.1 | SAMN04487961_0795 | SAMN04487961_3169 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.835 |
SFM58626.1 | ahcY | SAMN04487961_0795 | SAMN04487961_1786 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.814 |
SFM58626.1 | metE | SAMN04487961_0795 | SAMN04487961_3076 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.870 |
SFM58626.1 | metXS | SAMN04487961_0795 | SAMN04487961_0073 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. | 0.642 |
SFM58626.1 | metZ | SAMN04487961_0795 | SAMN04487961_0849 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.980 |
SFN15028.1 | SFM49188.1 | SAMN04487961_2231 | SAMN04487961_0457 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Cystathione beta-lyase. | 0.452 |
SFN15028.1 | SFM58626.1 | SAMN04487961_2231 | SAMN04487961_0795 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.589 |
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