Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM75720.1 | SFM75754.1 | SAMN04487961_1136 | SAMN04487961_1137 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | DNA-J related protein. | 0.668 |
SFM75720.1 | SFM75788.1 | SAMN04487961_1136 | SAMN04487961_1138 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | Polysaccharide deacetylase. | 0.518 |
SFM75720.1 | SFN16020.1 | SAMN04487961_1136 | SAMN04487961_2270 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | Hypoxanthine phosphoribosyltransferase. | 0.511 |
SFM75720.1 | SFN17712.1 | SAMN04487961_1136 | SAMN04487961_2344 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | Sulfur carrier protein ThiS. | 0.723 |
SFM75720.1 | SFN44020.1 | SAMN04487961_1136 | SAMN04487961_3100 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | Glutamate synthase (NADPH/NADH) large chain. | 0.834 |
SFM75720.1 | SFN52378.1 | SAMN04487961_1136 | SAMN04487961_3312 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.681 |
SFM75720.1 | argH | SAMN04487961_1136 | SAMN04487961_0111 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | Argininosuccinate lyase. | 0.517 |
SFM75720.1 | guaA | SAMN04487961_1136 | SAMN04487961_1073 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.807 |
SFM75720.1 | metG | SAMN04487961_1136 | SAMN04487961_2171 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.574 |
SFM75720.1 | pgi | SAMN04487961_1136 | SAMN04487961_0033 | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.534 |
SFM75754.1 | SFM75720.1 | SAMN04487961_1137 | SAMN04487961_1136 | DNA-J related protein. | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | 0.668 |
SFM75754.1 | SFM75788.1 | SAMN04487961_1137 | SAMN04487961_1138 | DNA-J related protein. | Polysaccharide deacetylase. | 0.883 |
SFM75754.1 | SFN52378.1 | SAMN04487961_1137 | SAMN04487961_3312 | DNA-J related protein. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.940 |
SFM75788.1 | SFM75720.1 | SAMN04487961_1138 | SAMN04487961_1136 | Polysaccharide deacetylase. | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | 0.518 |
SFM75788.1 | SFM75754.1 | SAMN04487961_1138 | SAMN04487961_1137 | Polysaccharide deacetylase. | DNA-J related protein. | 0.883 |
SFN16020.1 | SFM75720.1 | SAMN04487961_2270 | SAMN04487961_1136 | Hypoxanthine phosphoribosyltransferase. | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | 0.511 |
SFN16020.1 | SFN44020.1 | SAMN04487961_2270 | SAMN04487961_3100 | Hypoxanthine phosphoribosyltransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.587 |
SFN16020.1 | guaA | SAMN04487961_2270 | SAMN04487961_1073 | Hypoxanthine phosphoribosyltransferase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.973 |
SFN17712.1 | SFM75720.1 | SAMN04487961_2344 | SAMN04487961_1136 | Sulfur carrier protein ThiS. | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | 0.723 |
SFN44020.1 | SFM75720.1 | SAMN04487961_3100 | SAMN04487961_1136 | Glutamate synthase (NADPH/NADH) large chain. | tRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. | 0.834 |
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