Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM91291.1 | SFM91973.1 | SAMN04487961_1514 | SAMN04487961_1550 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.757 |
SFM91291.1 | SFN10113.1 | SAMN04487961_1514 | SAMN04487961_2156 | N-acetylmuramoyl-L-alanine amidase. | AmpD protein. | 0.837 |
SFM91953.1 | SFM91973.1 | SAMN04487961_1549 | SAMN04487961_1550 | Carboxypeptidase regulatory-like domain-containing protein. | Hypothetical protein. | 0.732 |
SFM91973.1 | SFM91291.1 | SAMN04487961_1550 | SAMN04487961_1514 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.757 |
SFM91973.1 | SFM91953.1 | SAMN04487961_1550 | SAMN04487961_1549 | Hypothetical protein. | Carboxypeptidase regulatory-like domain-containing protein. | 0.732 |
SFM91973.1 | SFN10113.1 | SAMN04487961_1550 | SAMN04487961_2156 | Hypothetical protein. | AmpD protein. | 0.434 |
SFM91973.1 | SFN61702.1 | SAMN04487961_1550 | SAMN04487961_3529 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.420 |
SFN10113.1 | SFM91291.1 | SAMN04487961_2156 | SAMN04487961_1514 | AmpD protein. | N-acetylmuramoyl-L-alanine amidase. | 0.837 |
SFN10113.1 | SFM91973.1 | SAMN04487961_2156 | SAMN04487961_1550 | AmpD protein. | Hypothetical protein. | 0.434 |
SFN61702.1 | SFM91973.1 | SAMN04487961_3529 | SAMN04487961_1550 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Hypothetical protein. | 0.420 |