STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM97274.1Lactoylglutathione lyase. (182 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
 
  
 0.974
SFN26294.1
Lactoylglutathione lyase.
  
  
 
0.962
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.948
SFN15028.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.909
ilvA
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
   
 0.875
SFN24791.1
Glyoxylase, beta-lactamase superfamily II.
     
 0.788
SFN24248.1
P-cymene monooxygenase electron transfer component.
  
 
 0.711
SFN52627.1
Glyoxylase, beta-lactamase superfamily II.
  
 
 0.666
SFM39462.1
CDP-4-dehydro-6-deoxyglucose reductase.
   
 
 0.664
SFM57750.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
  
  0.642
Your Current Organism:
Marinobacter pelagius
NCBI taxonomy Id: 379482
Other names: CGMCC 1.6775, JCM 14804, M. pelagius, Marinobacter pelagius Xu et al. 2008, Marinobacter sp. HS225, strain HS225
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