STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN18104.1Starvation-inducible DNA-binding protein; Belongs to the Dps family. (157 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.932
SFM89900.1
SSU ribosomal protein S30P /sigma 54 modulation protein.
   
    0.679
SFM48771.1
Cu+-exporting ATPase.
  
  
 0.657
SFN15028.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 
 0.647
SFM98402.1
Putative serine protein kinase, PrkA.
   
    0.608
SFN18079.1
Uncharacterized membrane protein.
 
     0.584
SFN11314.1
NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family.
  
  
 0.530
SFN57363.1
NAD(P)H dehydrogenase (quinone).
  
  
 0.530
SFM81109.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.503
SFN28059.1
Hypothetical protein.
  
  
 0.487
Your Current Organism:
Marinobacter pelagius
NCBI taxonomy Id: 379482
Other names: CGMCC 1.6775, JCM 14804, M. pelagius, Marinobacter pelagius Xu et al. 2008, Marinobacter sp. HS225, strain HS225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.