Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM46832.1 | SFN05813.1 | SAMN04487961_0367 | SAMN04487961_1976 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.976 |
SFM46832.1 | SFN15028.1 | SAMN04487961_0367 | SAMN04487961_2231 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.981 |
SFM46832.1 | SFN23546.1 | SAMN04487961_0367 | SAMN04487961_2515 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.975 |
SFM46832.1 | SFN29341.1 | SAMN04487961_0367 | SAMN04487961_2740 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | fatty-acyl-CoA synthase. | 0.770 |
SFM46832.1 | SFN52378.1 | SAMN04487961_0367 | SAMN04487961_3312 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.425 |
SFM46832.1 | rplF | SAMN04487961_0367 | SAMN04487961_3010 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.558 |
SFM83065.1 | SFM99232.1 | SAMN04487961_1409 | SAMN04487961_1850 | Capsule assembly protein Wzi. | Hypothetical protein. | 0.811 |
SFM83065.1 | SFN29341.1 | SAMN04487961_1409 | SAMN04487961_2740 | Capsule assembly protein Wzi. | fatty-acyl-CoA synthase. | 0.730 |
SFM83065.1 | rplF | SAMN04487961_1409 | SAMN04487961_3010 | Capsule assembly protein Wzi. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.786 |
SFM99232.1 | SFM83065.1 | SAMN04487961_1850 | SAMN04487961_1409 | Hypothetical protein. | Capsule assembly protein Wzi. | 0.811 |
SFM99232.1 | SFN29341.1 | SAMN04487961_1850 | SAMN04487961_2740 | Hypothetical protein. | fatty-acyl-CoA synthase. | 0.848 |
SFM99232.1 | SFN34011.1 | SAMN04487961_1850 | SAMN04487961_2834 | Hypothetical protein. | Undecaprenyl-diphosphatase. | 0.811 |
SFM99232.1 | SFN36212.1 | SAMN04487961_1850 | SAMN04487961_2911 | Hypothetical protein. | Undecaprenyl-diphosphatase. | 0.812 |
SFM99232.1 | rplF | SAMN04487961_1850 | SAMN04487961_3010 | Hypothetical protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.966 |
SFN05813.1 | SFM46832.1 | SAMN04487961_1976 | SAMN04487961_0367 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.976 |
SFN05813.1 | SFN15028.1 | SAMN04487961_1976 | SAMN04487961_2231 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.981 |
SFN05813.1 | SFN23546.1 | SAMN04487961_1976 | SAMN04487961_2515 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.955 |
SFN05813.1 | SFN29341.1 | SAMN04487961_1976 | SAMN04487961_2740 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | fatty-acyl-CoA synthase. | 0.770 |
SFN05813.1 | SFN52378.1 | SAMN04487961_1976 | SAMN04487961_3312 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.425 |
SFN05813.1 | rplF | SAMN04487961_1976 | SAMN04487961_3010 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.558 |
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