Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFM36845.1 | SFM91291.1 | SAMN04487961_0020 | SAMN04487961_1514 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | N-acetylmuramoyl-L-alanine amidase. | 0.631 |
| SFM36845.1 | SFN43550.1 | SAMN04487961_0020 | SAMN04487961_3086 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Sporulation related domain-containing protein. | 0.950 |
| SFM36845.1 | ftsI | SAMN04487961_0020 | SAMN04487961_2970 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.952 |
| SFM36845.1 | ftsW | SAMN04487961_0020 | SAMN04487961_2965 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.718 |
| SFM36845.1 | mtgA | SAMN04487961_0020 | SAMN04487961_1671 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.702 |
| SFM39106.1 | SFN43550.1 | SAMN04487961_0106 | SAMN04487961_3086 | Hypothetical protein. | Sporulation related domain-containing protein. | 0.720 |
| SFM91291.1 | SFM36845.1 | SAMN04487961_1514 | SAMN04487961_0020 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.631 |
| SFM91291.1 | SFN43550.1 | SAMN04487961_1514 | SAMN04487961_3086 | N-acetylmuramoyl-L-alanine amidase. | Sporulation related domain-containing protein. | 0.867 |
| SFM91291.1 | ftsA | SAMN04487961_1514 | SAMN04487961_2960 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.634 |
| SFM91291.1 | ftsI | SAMN04487961_1514 | SAMN04487961_2970 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.659 |
| SFM91291.1 | ftsQ | SAMN04487961_1514 | SAMN04487961_2961 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.407 |
| SFM91291.1 | ftsW | SAMN04487961_1514 | SAMN04487961_2965 | N-acetylmuramoyl-L-alanine amidase. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.480 |
| SFM91291.1 | mtgA | SAMN04487961_1514 | SAMN04487961_1671 | N-acetylmuramoyl-L-alanine amidase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.631 |
| SFN43550.1 | SFM36845.1 | SAMN04487961_3086 | SAMN04487961_0020 | Sporulation related domain-containing protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.950 |
| SFN43550.1 | SFM39106.1 | SAMN04487961_3086 | SAMN04487961_0106 | Sporulation related domain-containing protein. | Hypothetical protein. | 0.720 |
| SFN43550.1 | SFM91291.1 | SAMN04487961_3086 | SAMN04487961_1514 | Sporulation related domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.867 |
| SFN43550.1 | SFN44020.1 | SAMN04487961_3086 | SAMN04487961_3100 | Sporulation related domain-containing protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.721 |
| SFN43550.1 | argS | SAMN04487961_3086 | SAMN04487961_3087 | Sporulation related domain-containing protein. | arginyl-tRNA synthetase. | 0.885 |
| SFN43550.1 | ftsA | SAMN04487961_3086 | SAMN04487961_2960 | Sporulation related domain-containing protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.949 |
| SFN43550.1 | ftsI | SAMN04487961_3086 | SAMN04487961_2970 | Sporulation related domain-containing protein. | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.859 |
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