STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN55200.1TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (234 aa)    
Predicted Functional Partners:
SFN55221.1
TRAP transporter, DctM subunit.
 
  0.968
SFN55175.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
  0.912
SFM55256.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
  0.817
SFM55228.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein.
 
 
  0.814
SFN18171.1
TRAP transporter, DctM subunit.
 
  0.812
SFM55286.1
TRAP transporter, DctM subunit.
 
  0.811
SFN60346.1
TRAP transporter, DctM subunit.
 
  0.811
SFM44366.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
  0.809
SFN60374.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
  0.808
SFN18212.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
  0.806
Your Current Organism:
Marinobacter pelagius
NCBI taxonomy Id: 379482
Other names: CGMCC 1.6775, JCM 14804, M. pelagius, Marinobacter pelagius Xu et al. 2008, Marinobacter sp. HS225, strain HS225
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.