Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM54765.1 | SFN60023.1 | SAMN04487961_0652 | SAMN04487961_3469 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.463 |
SFM54765.1 | SFN60085.1 | SAMN04487961_0652 | SAMN04487961_3471 | Predicted arabinose efflux permease, MFS family. | Dicarboxylate transport. | 0.547 |
SFN60023.1 | SFM54765.1 | SAMN04487961_3469 | SAMN04487961_0652 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.463 |
SFN60023.1 | SFN60056.1 | SAMN04487961_3469 | SAMN04487961_3470 | Hypothetical protein. | YnbE-like lipoprotein. | 0.945 |
SFN60023.1 | SFN60085.1 | SAMN04487961_3469 | SAMN04487961_3471 | Hypothetical protein. | Dicarboxylate transport. | 0.911 |
SFN60023.1 | SFN60115.1 | SAMN04487961_3469 | SAMN04487961_3472 | Hypothetical protein. | Probable lipoprotein NlpC. | 0.421 |
SFN60056.1 | SFN60023.1 | SAMN04487961_3470 | SAMN04487961_3469 | YnbE-like lipoprotein. | Hypothetical protein. | 0.945 |
SFN60056.1 | SFN60085.1 | SAMN04487961_3470 | SAMN04487961_3471 | YnbE-like lipoprotein. | Dicarboxylate transport. | 0.931 |
SFN60056.1 | SFN60115.1 | SAMN04487961_3470 | SAMN04487961_3472 | YnbE-like lipoprotein. | Probable lipoprotein NlpC. | 0.474 |
SFN60085.1 | SFM54765.1 | SAMN04487961_3471 | SAMN04487961_0652 | Dicarboxylate transport. | Predicted arabinose efflux permease, MFS family. | 0.547 |
SFN60085.1 | SFN60023.1 | SAMN04487961_3471 | SAMN04487961_3469 | Dicarboxylate transport. | Hypothetical protein. | 0.911 |
SFN60085.1 | SFN60056.1 | SAMN04487961_3471 | SAMN04487961_3470 | Dicarboxylate transport. | YnbE-like lipoprotein. | 0.931 |
SFN60085.1 | SFN60115.1 | SAMN04487961_3471 | SAMN04487961_3472 | Dicarboxylate transport. | Probable lipoprotein NlpC. | 0.546 |
SFN60115.1 | SFN60023.1 | SAMN04487961_3472 | SAMN04487961_3469 | Probable lipoprotein NlpC. | Hypothetical protein. | 0.421 |
SFN60115.1 | SFN60056.1 | SAMN04487961_3472 | SAMN04487961_3470 | Probable lipoprotein NlpC. | YnbE-like lipoprotein. | 0.474 |
SFN60115.1 | SFN60085.1 | SAMN04487961_3472 | SAMN04487961_3471 | Probable lipoprotein NlpC. | Dicarboxylate transport. | 0.546 |