STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_01183Uncharacterized protein. (553 aa)    
Predicted Functional Partners:
LELG_01064
Uncharacterized protein.
  
 
 
0.798
LELG_01405
PITH domain-containing protein.
    
 0.771
LELG_01000
Uncharacterized protein.
    
 0.631
LELG_05778
Chitin deacetylase 2.
    
 0.631
LELG_02103
Extracellular matrix protein 14.
   
 
 0.496
LELG_00316
Kexin.
  
 
 0.479
LELG_02017
Uncharacterized protein.
   
 0.461
LELG_01896
Calponin-homology (CH) domain-containing protein.
    
 0.439
LELG_03404
Uncharacterized protein.
  
 0.421
LELG_00700
Uncharacterized protein.
   
 0.411
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.