STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_02020Glyco_hydro_63 domain-containing protein. (947 aa)    
Predicted Functional Partners:
LELG_04604
Glycogen debranching enzyme.
   
    0.734
LELG_05376
Uncharacterized protein.
   
    0.729
LELG_04122
Uncharacterized protein.
   
    0.722
LELG_04169
Uncharacterized protein.
   
    0.692
LELG_00357
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
   0.600
LELG_03651
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
    0.561
LELG_05684
Alpha-mann_mid domain-containing protein.
   
  
 0.547
LELG_01634
Arf-GAP domain-containing protein.
   
  
 0.507
LELG_03104
PPM-type phosphatase domain-containing protein.
 
  
 
 0.498
LELG_04423
Uncharacterized protein.
    
 
 0.479
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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