STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_02491HEM4 domain-containing protein. (283 aa)    
Predicted Functional Partners:
LELG_02626
Porphobilinogen deaminase.
  
 0.999
LELG_00730
Uncharacterized protein; Belongs to the precorrin methyltransferase family.
  
 
 0.986
LELG_02616
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.986
LELG_01310
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
 0.966
LELG_03040
Uncharacterized protein.
  
 
 0.870
LELG_02473
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.704
LELG_00372
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
  
 0.672
LELG_02000
Coproporphyrinogen III oxidase.
     
 0.651
LELG_04819
Fe-S_biosyn domain-containing protein.
   
  
 0.632
LELG_00121
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
      
 0.623
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.