STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_03868DUF1713 domain-containing protein. (165 aa)    
Predicted Functional Partners:
LELG_05056
Uncharacterized protein.
    
 0.952
LELG_04354
Uncharacterized protein.
    
 0.919
LELG_00792
Uncharacterized protein.
   
 0.788
LELG_00017
Uncharacterized protein.
    
 0.775
LELG_05510
L51_S25_CI-B8 domain-containing protein.
   
   0.622
LELG_03832
Uncharacterized protein.
   
   0.615
LELG_04611
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.598
LELG_03471
Uncharacterized protein.
   
   0.591
LELG_04063
Sod_Fe_C domain-containing protein.
   
 
 0.590
LELG_02033
Ribosomal_L30 domain-containing protein; Belongs to the universal ribosomal protein uL30 family.
   
   0.588
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.