STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_0408740S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (226 aa)    
Predicted Functional Partners:
LELG_00221
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.999
LELG_00294
60S ribosomal protein L14-A.
  
 
 0.999
LELG_00406
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
LELG_00407
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
  
 0.999
LELG_00408
Uncharacterized protein.
   
 
 0.999
LELG_00607
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
LELG_00712
40S ribosomal protein S17-B.
   
 0.999
LELG_00768
60S ribosomal protein L31.
   
 
 0.999
LELG_00769
60S ribosomal protein L2.
  
 
 0.999
LELG_00771
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.999
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.