STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_04947Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (331 aa)    
Predicted Functional Partners:
LELG_04944
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 
0.904
LELG_05019
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.751
LELG_03012
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.613
LELG_00630
Thymidylate synthase.
  
 
 0.612
LELG_01753
Glycyl-tRNA synthetase 1.
  
  
 0.595
LELG_04127
Nucleoside diphosphate kinase.
   
 
 0.593
LELG_04706
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.538
LELG_04845
Nudix hydrolase domain-containing protein.
    
  0.536
LELG_00650
Uncharacterized protein.
   
 
 0.499
LELG_01506
Threonyl-tRNA synthetase, mitochondrial.
      
 0.497
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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