STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LELG_05450Epimerase domain-containing protein. (336 aa)    
Predicted Functional Partners:
LELG_02908
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.757
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.754
LELG_02692
Uncharacterized protein.
   
 0.753
LELG_03255
40S ribosomal protein S3.
   
 0.752
LELG_02179
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.751
LELG_03685
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.747
LELG_00995
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.744
LELG_03100
40S ribosomal protein S20.
   
 0.744
LELG_03114
40S ribosomal protein S29-B.
   
 0.741
LELG_02867
Uncharacterized protein.
   
 0.737
Your Current Organism:
Lodderomyces elongisporus
NCBI taxonomy Id: 379508
Other names: L. elongisporus NRRL YB-4239, Lodderomyces elongisporus NRRL YB-4239
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