Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LELG_00176 | LELG_01813 | A5DS40 | A5DWS6 | ATP synthase subunit gamma. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
LELG_00176 | LELG_01954 | A5DS40 | A5DX67 | ATP synthase subunit gamma. | Tr-type G domain-containing protein. | 0.634 |
LELG_00176 | LELG_04299 | A5DS40 | A5E3W1 | ATP synthase subunit gamma. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
LELG_00176 | MRH4 | A5DS40 | A5E5F7 | ATP synthase subunit gamma. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.757 |
LELG_00681 | LELG_01954 | A5DTJ5 | A5DX67 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.993 |
LELG_00681 | LELG_03537 | A5DTJ5 | A5E1Q0 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.408 |
LELG_00681 | MRH4 | A5DTJ5 | A5E5F7 | Uncharacterized protein. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.774 |
LELG_00872 | LELG_03537 | A5DU36 | A5E1Q0 | Uncharacterized protein; Belongs to the DEAD box helicase family. | TPR_REGION domain-containing protein. | 0.407 |
LELG_00872 | LELG_03823 | A5DU36 | A5E2I6 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Elongation factor 3. | 0.510 |
LELG_00872 | LELG_05370 | A5DU36 | A5E6Y1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | mRNA export factor elf1. | 0.531 |
LELG_00872 | LSM3 | A5DU36 | A5E712 | Uncharacterized protein; Belongs to the DEAD box helicase family. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.797 |
LELG_00872 | MRH4 | A5DU36 | A5E5F7 | Uncharacterized protein; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.766 |
LELG_01813 | LELG_00176 | A5DWS6 | A5DS40 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit gamma. | 0.999 |
LELG_01813 | LELG_01954 | A5DWS6 | A5DX67 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Tr-type G domain-containing protein. | 0.648 |
LELG_01813 | LELG_04299 | A5DWS6 | A5E3W1 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
LELG_01813 | MRH4 | A5DWS6 | A5E5F7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP-dependent RNA helicase MRH4, mitochondrial; ATP-binding RNA helicase involved in mitochondrial RNA metabolism. Required for maintenance of mitochondrial DNA (By similarity); Belongs to the DEAD box helicase family. MRH4 subfamily. | 0.727 |
LELG_01954 | LELG_00176 | A5DX67 | A5DS40 | Tr-type G domain-containing protein. | ATP synthase subunit gamma. | 0.634 |
LELG_01954 | LELG_00681 | A5DX67 | A5DTJ5 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.993 |
LELG_01954 | LELG_01813 | A5DX67 | A5DWS6 | Tr-type G domain-containing protein. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.648 |
LELG_01954 | LELG_03537 | A5DX67 | A5E1Q0 | Tr-type G domain-containing protein. | TPR_REGION domain-containing protein. | 0.999 |
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