STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP9RP9 pre-mRNA splicing factor. (215 aa)    
Predicted Functional Partners:
DHX38
DEAH-box helicase 38.
   
 
 0.862
CWC25
CWC25 spliceosome associated protein homolog.
   
 
 0.828
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.817
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.793
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.793
SAP30
Sin3A associated protein 30.
    
 0.785
SAP30L
SAP30 like.
    
 0.785
SNW1
SNW domain containing 1.
   
 
 0.761
ENSPCOP00000009093
Uncharacterized protein.
   
 
 0.761
NKAP
NFKB activating protein.
   
 
 0.725
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.