Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APLP1 | F12 | ENSPCOP00000016040 | ENSPCOP00000010528 | Amyloid beta precursor like protein 1. | Coagulation factor XII. | 0.631 |
APLP1 | HABP2 | ENSPCOP00000016040 | ENSPCOP00000001621 | Amyloid beta precursor like protein 1. | Hyaluronan binding protein 2. | 0.631 |
APLP1 | HGFAC | ENSPCOP00000016040 | ENSPCOP00000005222 | Amyloid beta precursor like protein 1. | HGF activator. | 0.631 |
APLP1 | LOC105809338 | ENSPCOP00000016040 | ENSPCOP00000003906 | Amyloid beta precursor like protein 1. | Uncharacterized protein. | 0.698 |
APLP1 | LRIT1 | ENSPCOP00000016040 | ENSPCOP00000002233 | Amyloid beta precursor like protein 1. | Leucine rich repeat, Ig-like and transmembrane domains 1. | 0.520 |
APLP1 | LRIT3 | ENSPCOP00000016040 | ENSPCOP00000022884 | Amyloid beta precursor like protein 1. | Leucine rich repeat, Ig-like and transmembrane domains 3. | 0.520 |
ENSPCOP00000019705 | F12 | ENSPCOP00000019705 | ENSPCOP00000010528 | Uncharacterized protein. | Coagulation factor XII. | 0.512 |
ENSPCOP00000019705 | HABP2 | ENSPCOP00000019705 | ENSPCOP00000001621 | Uncharacterized protein. | Hyaluronan binding protein 2. | 0.524 |
ENSPCOP00000019705 | HGFAC | ENSPCOP00000019705 | ENSPCOP00000005222 | Uncharacterized protein. | HGF activator. | 0.512 |
ENSPCOP00000019705 | LOC105809338 | ENSPCOP00000019705 | ENSPCOP00000003906 | Uncharacterized protein. | Uncharacterized protein. | 0.700 |
ENSPCOP00000019705 | LRIT1 | ENSPCOP00000019705 | ENSPCOP00000002233 | Uncharacterized protein. | Leucine rich repeat, Ig-like and transmembrane domains 1. | 0.715 |
ENSPCOP00000019705 | LRIT3 | ENSPCOP00000019705 | ENSPCOP00000022884 | Uncharacterized protein. | Leucine rich repeat, Ig-like and transmembrane domains 3. | 0.715 |
ENSPCOP00000019705 | PTPN11 | ENSPCOP00000019705 | ENSPCOP00000029437 | Uncharacterized protein. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.758 |
ENSPCOP00000019705 | PTPN6 | ENSPCOP00000019705 | ENSPCOP00000013745 | Uncharacterized protein. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.758 |
ENSPCOP00000019705 | TYROBP | ENSPCOP00000019705 | ENSPCOP00000016651 | Uncharacterized protein. | TYRO protein tyrosine kinase binding protein. | 0.518 |
F12 | APLP1 | ENSPCOP00000010528 | ENSPCOP00000016040 | Coagulation factor XII. | Amyloid beta precursor like protein 1. | 0.631 |
F12 | ENSPCOP00000019705 | ENSPCOP00000010528 | ENSPCOP00000019705 | Coagulation factor XII. | Uncharacterized protein. | 0.512 |
F12 | HABP2 | ENSPCOP00000010528 | ENSPCOP00000001621 | Coagulation factor XII. | Hyaluronan binding protein 2. | 0.672 |
F12 | HGFAC | ENSPCOP00000010528 | ENSPCOP00000005222 | Coagulation factor XII. | HGF activator. | 0.638 |
F12 | LOC105809338 | ENSPCOP00000010528 | ENSPCOP00000003906 | Coagulation factor XII. | Uncharacterized protein. | 0.628 |
page 1 of 5