STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF13BTNF superfamily member 13b; Belongs to the tumor necrosis factor family. (244 aa)    
Predicted Functional Partners:
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.997
TNFRSF17
TNF receptor superfamily member 17.
    
 0.996
TNFRSF13B
TNF receptor superfamily member 13B.
    
 0.981
ENSPCOP00000001258
Uncharacterized protein.
    
 
 0.915
TNFSF12
TNF superfamily member 12; Belongs to the tumor necrosis factor family.
   
 0.870
CD40LG
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
   
 
 0.856
TNFSF11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
   
 0.841
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.831
LTBR
Lymphotoxin beta receptor.
   
 
 0.785
CD40
CD40 molecule.
     
 0.784
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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