Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPCOP00000006977 | PIN1 | ENSPCOP00000006977 | ENSPCOP00000012221 | IRF-3 domain-containing protein. | Peptidyl-prolyl cis-trans isomerase. | 0.840 |
ENSPCOP00000006977 | SFN | ENSPCOP00000006977 | ENSPCOP00000001692 | IRF-3 domain-containing protein. | Stratifin; Belongs to the 14-3-3 family. | 0.527 |
HIPK2 | PIN1 | ENSPCOP00000003838 | ENSPCOP00000012221 | Homeodomain interacting protein kinase 2. | Peptidyl-prolyl cis-trans isomerase. | 0.818 |
HIPK2 | PML | ENSPCOP00000003838 | ENSPCOP00000020298 | Homeodomain interacting protein kinase 2. | Promyelocytic leukemia. | 0.746 |
HIPK2 | TP53 | ENSPCOP00000003838 | ENSPCOP00000031758 | Homeodomain interacting protein kinase 2. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.993 |
IRF3 | PIN1 | ENSPCOP00000005698 | ENSPCOP00000012221 | IRF tryptophan pentad repeat domain-containing protein. | Peptidyl-prolyl cis-trans isomerase. | 0.840 |
IRF3 | SFN | ENSPCOP00000005698 | ENSPCOP00000001692 | IRF tryptophan pentad repeat domain-containing protein. | Stratifin; Belongs to the 14-3-3 family. | 0.527 |
PIN1 | ENSPCOP00000006977 | ENSPCOP00000012221 | ENSPCOP00000006977 | Peptidyl-prolyl cis-trans isomerase. | IRF-3 domain-containing protein. | 0.840 |
PIN1 | HIPK2 | ENSPCOP00000012221 | ENSPCOP00000003838 | Peptidyl-prolyl cis-trans isomerase. | Homeodomain interacting protein kinase 2. | 0.818 |
PIN1 | IRF3 | ENSPCOP00000012221 | ENSPCOP00000005698 | Peptidyl-prolyl cis-trans isomerase. | IRF tryptophan pentad repeat domain-containing protein. | 0.840 |
PIN1 | PML | ENSPCOP00000012221 | ENSPCOP00000020298 | Peptidyl-prolyl cis-trans isomerase. | Promyelocytic leukemia. | 0.790 |
PIN1 | POLR2A | ENSPCOP00000012221 | ENSPCOP00000025964 | Peptidyl-prolyl cis-trans isomerase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
PIN1 | PPIA | ENSPCOP00000012221 | ENSPCOP00000030765 | Peptidyl-prolyl cis-trans isomerase. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.835 |
PIN1 | PPIF | ENSPCOP00000012221 | ENSPCOP00000015002 | Peptidyl-prolyl cis-trans isomerase. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.835 |
PIN1 | RANBP2 | ENSPCOP00000012221 | ENSPCOP00000003016 | Peptidyl-prolyl cis-trans isomerase. | RAN binding protein 2. | 0.796 |
PIN1 | SFN | ENSPCOP00000012221 | ENSPCOP00000001692 | Peptidyl-prolyl cis-trans isomerase. | Stratifin; Belongs to the 14-3-3 family. | 0.912 |
PIN1 | TP53 | ENSPCOP00000012221 | ENSPCOP00000031758 | Peptidyl-prolyl cis-trans isomerase. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.925 |
PML | HIPK2 | ENSPCOP00000020298 | ENSPCOP00000003838 | Promyelocytic leukemia. | Homeodomain interacting protein kinase 2. | 0.746 |
PML | PIN1 | ENSPCOP00000020298 | ENSPCOP00000012221 | Promyelocytic leukemia. | Peptidyl-prolyl cis-trans isomerase. | 0.790 |
PML | RANBP2 | ENSPCOP00000020298 | ENSPCOP00000003016 | Promyelocytic leukemia. | RAN binding protein 2. | 0.528 |
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