Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPCOP00000020658 | FAM120B | ENSPCOP00000020658 | ENSPCOP00000014168 | Tudor domain-containing protein. | Family with sequence similarity 120B. | 0.755 |
ENSPCOP00000020658 | LOC105816610 | ENSPCOP00000020658 | ENSPCOP00000021109 | Tudor domain-containing protein. | Small nuclear ribonucleoprotein Sm D1-like. | 0.983 |
ENSPCOP00000020658 | SNRPD1 | ENSPCOP00000020658 | ENSPCOP00000005021 | Tudor domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. | 0.983 |
ENSPCOP00000020658 | SNRPF | ENSPCOP00000020658 | ENSPCOP00000023394 | Tudor domain-containing protein. | Small nuclear ribonucleoprotein polypeptide F. | 0.977 |
FAM120B | ENSPCOP00000020658 | ENSPCOP00000014168 | ENSPCOP00000020658 | Family with sequence similarity 120B. | Tudor domain-containing protein. | 0.755 |
FAM120B | FANCM | ENSPCOP00000014168 | ENSPCOP00000006447 | Family with sequence similarity 120B. | FA complementation group M. | 0.770 |
FAM120B | LOC105816610 | ENSPCOP00000014168 | ENSPCOP00000021109 | Family with sequence similarity 120B. | Small nuclear ribonucleoprotein Sm D1-like. | 0.689 |
FAM120B | MUS81 | ENSPCOP00000014168 | ENSPCOP00000013856 | Family with sequence similarity 120B. | MUS81 structure-specific endonuclease subunit. | 0.739 |
FAM120B | PCNA | ENSPCOP00000014168 | ENSPCOP00000008972 | Family with sequence similarity 120B. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.675 |
FAM120B | POLD1 | ENSPCOP00000014168 | ENSPCOP00000015021 | Family with sequence similarity 120B. | DNA polymerase. | 0.737 |
FAM120B | POLD2 | ENSPCOP00000014168 | ENSPCOP00000023689 | Family with sequence similarity 120B. | DNA polymerase delta 2, accessory subunit. | 0.789 |
FAM120B | POLD4 | ENSPCOP00000014168 | ENSPCOP00000023120 | Family with sequence similarity 120B. | Uncharacterized protein. | 0.709 |
FAM120B | SNRPD1 | ENSPCOP00000014168 | ENSPCOP00000005021 | Family with sequence similarity 120B. | Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. | 0.689 |
FAM120B | SNRPF | ENSPCOP00000014168 | ENSPCOP00000023394 | Family with sequence similarity 120B. | Small nuclear ribonucleoprotein polypeptide F. | 0.711 |
FANCM | FAM120B | ENSPCOP00000006447 | ENSPCOP00000014168 | FA complementation group M. | Family with sequence similarity 120B. | 0.770 |
FANCM | MUS81 | ENSPCOP00000006447 | ENSPCOP00000013856 | FA complementation group M. | MUS81 structure-specific endonuclease subunit. | 0.999 |
FANCM | PCNA | ENSPCOP00000006447 | ENSPCOP00000008972 | FA complementation group M. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.996 |
FANCM | POLD1 | ENSPCOP00000006447 | ENSPCOP00000015021 | FA complementation group M. | DNA polymerase. | 0.963 |
LOC105816610 | ENSPCOP00000020658 | ENSPCOP00000021109 | ENSPCOP00000020658 | Small nuclear ribonucleoprotein Sm D1-like. | Tudor domain-containing protein. | 0.983 |
LOC105816610 | FAM120B | ENSPCOP00000021109 | ENSPCOP00000014168 | Small nuclear ribonucleoprotein Sm D1-like. | Family with sequence similarity 120B. | 0.689 |
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