STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RARGRetinoic acid receptor gamma. (458 aa)    
Predicted Functional Partners:
RXRB
Retinoid X receptor beta.
   
0.933
NCOR1
Nuclear receptor corepressor 1.
    
 0.925
RXRA
Retinoid X receptor alpha.
   
0.921
RXRG
Retinoid X receptor gamma.
   
0.912
PML
Promyelocytic leukemia.
    
 0.887
MED1
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.886
RARA
Retinoic acid receptor alpha.
  
0.881
NCOR2
Nuclear receptor corepressor 2.
    
 0.877
NCOA1
Nuclear receptor coactivator 1.
    
 0.849
NCOA2
Nuclear receptor coactivator.
    
 0.830
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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