ENSPCOP00000017266 protein (Propithecus coquereli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPCOP00000017266

Uncharacterized protein. (152 aa)

Predicted Functional Partners:

FAU

0.999

ENSPCOP00000028802

0.999

RPL35

0.992

RPLP0

0.991

RPL29

0.990

RPL13

0.990

RPL10

0.988

RPL18

0.987

RPL18A

0.985

MRTO4

0.981

Your Current Organism:

Propithecus coquereli

NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCOP00000017266	ENSPCOP00000028802	ENSPCOP00000017266	ENSPCOP00000028802	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.999
ENSPCOP00000017266	FAU	ENSPCOP00000017266	ENSPCOP00000012883	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPCOP00000017266	MRTO4	ENSPCOP00000017266	ENSPCOP00000006133	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.981
ENSPCOP00000017266	RPL10	ENSPCOP00000017266	ENSPCOP00000028900	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.988
ENSPCOP00000017266	RPL13	ENSPCOP00000017266	ENSPCOP00000024863	Uncharacterized protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.990
ENSPCOP00000017266	RPL18	ENSPCOP00000017266	ENSPCOP00000027648	Uncharacterized protein.	Ribosomal protein L18.	0.987
ENSPCOP00000017266	RPL18A	ENSPCOP00000017266	ENSPCOP00000025189	Uncharacterized protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.985
ENSPCOP00000017266	RPL29	ENSPCOP00000017266	ENSPCOP00000016698	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.990
ENSPCOP00000017266	RPL35	ENSPCOP00000017266	ENSPCOP00000028260	Uncharacterized protein.	Ribosomal protein L35.	0.992
ENSPCOP00000017266	RPLP0	ENSPCOP00000017266	ENSPCOP00000008425	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.991
ENSPCOP00000028802	ENSPCOP00000017266	ENSPCOP00000028802	ENSPCOP00000017266	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
ENSPCOP00000028802	FAU	ENSPCOP00000028802	ENSPCOP00000012883	Ubiquitin-like domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.997
ENSPCOP00000028802	MRTO4	ENSPCOP00000028802	ENSPCOP00000006133	Ubiquitin-like domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.999
ENSPCOP00000028802	RPL10	ENSPCOP00000028802	ENSPCOP00000028900	Ubiquitin-like domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.999
ENSPCOP00000028802	RPL13	ENSPCOP00000028802	ENSPCOP00000024863	Ubiquitin-like domain-containing protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
ENSPCOP00000028802	RPL18	ENSPCOP00000028802	ENSPCOP00000027648	Ubiquitin-like domain-containing protein.	Ribosomal protein L18.	0.999
ENSPCOP00000028802	RPL18A	ENSPCOP00000028802	ENSPCOP00000025189	Ubiquitin-like domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
ENSPCOP00000028802	RPL29	ENSPCOP00000028802	ENSPCOP00000016698	Ubiquitin-like domain-containing protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
ENSPCOP00000028802	RPL35	ENSPCOP00000028802	ENSPCOP00000028260	Ubiquitin-like domain-containing protein.	Ribosomal protein L35.	0.999
ENSPCOP00000028802	RPLP0	ENSPCOP00000028802	ENSPCOP00000008425	Ubiquitin-like domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999