STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP2Single stranded DNA binding protein 2. (310 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 
 0.981
ISL1
ISL LIM homeobox 1.
    
 
 0.891
ISL2
ISL LIM homeobox 2.
    
 
 0.890
LMO4
LIM domain only 4.
    
 
 0.884
LDB2
LIM domain binding 2.
    
 
 0.847
LMX1B
LIM homeobox transcription factor 1 beta.
    
   0.802
LHX4
LIM homeobox 4.
    
 
 0.758
SSBP4
Single stranded DNA binding protein 4.
  
 
 
0.727
SSBP3
Single stranded DNA binding protein 3.
  
 
 
0.726
LHX6
LIM homeobox 6.
    
   0.673
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.