Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA6 | ISL1 | ENSPCOP00000027588 | ENSPCOP00000012878 | GATA binding protein 6. | ISL LIM homeobox 1. | 0.518 |
GATA6 | ISL2 | ENSPCOP00000027588 | ENSPCOP00000007682 | GATA binding protein 6. | ISL LIM homeobox 2. | 0.518 |
GATA6 | LDB1 | ENSPCOP00000027588 | ENSPCOP00000006397 | GATA binding protein 6. | LIM domain binding 1. | 0.755 |
GATA6 | LDB2 | ENSPCOP00000027588 | ENSPCOP00000012892 | GATA binding protein 6. | LIM domain binding 2. | 0.677 |
GATA6 | PTF1A | ENSPCOP00000027588 | ENSPCOP00000022344 | GATA binding protein 6. | Pancreas associated transcription factor 1a. | 0.664 |
GATA6 | TCF12 | ENSPCOP00000027588 | ENSPCOP00000013479 | GATA binding protein 6. | Transcription factor 12. | 0.514 |
GATA6 | TCF3 | ENSPCOP00000027588 | ENSPCOP00000029447 | GATA binding protein 6. | Transcription factor 3. | 0.464 |
GATA6 | TCF4 | ENSPCOP00000027588 | ENSPCOP00000015047 | GATA binding protein 6. | Transcription factor 4. | 0.542 |
ISL1 | GATA6 | ENSPCOP00000012878 | ENSPCOP00000027588 | ISL LIM homeobox 1. | GATA binding protein 6. | 0.518 |
ISL1 | LDB1 | ENSPCOP00000012878 | ENSPCOP00000006397 | ISL LIM homeobox 1. | LIM domain binding 1. | 0.943 |
ISL1 | LDB2 | ENSPCOP00000012878 | ENSPCOP00000012892 | ISL LIM homeobox 1. | LIM domain binding 2. | 0.940 |
ISL1 | PTF1A | ENSPCOP00000012878 | ENSPCOP00000022344 | ISL LIM homeobox 1. | Pancreas associated transcription factor 1a. | 0.704 |
ISL1 | TCF12 | ENSPCOP00000012878 | ENSPCOP00000013479 | ISL LIM homeobox 1. | Transcription factor 12. | 0.539 |
ISL1 | TCF3 | ENSPCOP00000012878 | ENSPCOP00000029447 | ISL LIM homeobox 1. | Transcription factor 3. | 0.539 |
ISL1 | TCF4 | ENSPCOP00000012878 | ENSPCOP00000015047 | ISL LIM homeobox 1. | Transcription factor 4. | 0.539 |
ISL2 | GATA6 | ENSPCOP00000007682 | ENSPCOP00000027588 | ISL LIM homeobox 2. | GATA binding protein 6. | 0.518 |
ISL2 | LDB1 | ENSPCOP00000007682 | ENSPCOP00000006397 | ISL LIM homeobox 2. | LIM domain binding 1. | 0.916 |
ISL2 | LDB2 | ENSPCOP00000007682 | ENSPCOP00000012892 | ISL LIM homeobox 2. | LIM domain binding 2. | 0.913 |
ISL2 | PTF1A | ENSPCOP00000007682 | ENSPCOP00000022344 | ISL LIM homeobox 2. | Pancreas associated transcription factor 1a. | 0.682 |
ISL2 | TCF12 | ENSPCOP00000007682 | ENSPCOP00000013479 | ISL LIM homeobox 2. | Transcription factor 12. | 0.539 |
page 1 of 4