STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHA13Protocadherin alpha 13. (763 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
    
 0.580
UCKL1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.564
UCK1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.564
UCK2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.564
CTNNB1
Catenin beta 1.
    
 0.564
MYO9B
Myosin IXB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.553
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.553
FJX1
Four-jointed box kinase 1.
   
 0.551
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.532
CTNNAL1
Catenin alpha like 1.
    
 0.528
Your Current Organism:
Propithecus coquereli
NCBI taxonomy Id: 379532
Other names: P. coquereli, Propithecus verreauxi coquereli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.