Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BOP1 | PRSS12 | ENSPCOP00000022224 | ENSPCOP00000026941 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Serine protease 12; Belongs to the peptidase S1 family. | 0.561 |
ENSPCOP00000020894 | EPHB2 | ENSPCOP00000020894 | ENSPCOP00000000714 | WD_REPEATS_REGION domain-containing protein. | EPH receptor B2. | 0.508 |
ENSPCOP00000020894 | F12 | ENSPCOP00000020894 | ENSPCOP00000010528 | WD_REPEATS_REGION domain-containing protein. | Coagulation factor XII. | 0.967 |
ENSPCOP00000020894 | MET | ENSPCOP00000020894 | ENSPCOP00000021885 | WD_REPEATS_REGION domain-containing protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.522 |
ENSPCOP00000020894 | MST1R | ENSPCOP00000020894 | ENSPCOP00000023347 | WD_REPEATS_REGION domain-containing protein. | Macrophage stimulating 1 receptor. | 0.522 |
ENSPCOP00000020894 | PRSS12 | ENSPCOP00000020894 | ENSPCOP00000026941 | WD_REPEATS_REGION domain-containing protein. | Serine protease 12; Belongs to the peptidase S1 family. | 0.606 |
ENSPCOP00000020894 | PTK7 | ENSPCOP00000020894 | ENSPCOP00000012721 | WD_REPEATS_REGION domain-containing protein. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.517 |
ENSPCOP00000021167 | PRSS12 | ENSPCOP00000021167 | ENSPCOP00000026941 | Kazal-like domain-containing protein. | Serine protease 12; Belongs to the peptidase S1 family. | 0.695 |
EPHB2 | ENSPCOP00000020894 | ENSPCOP00000000714 | ENSPCOP00000020894 | EPH receptor B2. | WD_REPEATS_REGION domain-containing protein. | 0.508 |
EPHB2 | F12 | ENSPCOP00000000714 | ENSPCOP00000010528 | EPH receptor B2. | Coagulation factor XII. | 0.588 |
EPHB2 | L1CAM | ENSPCOP00000000714 | ENSPCOP00000003469 | EPH receptor B2. | L1 cell adhesion molecule. | 0.801 |
EPHB2 | PRSS12 | ENSPCOP00000000714 | ENSPCOP00000026941 | EPH receptor B2. | Serine protease 12; Belongs to the peptidase S1 family. | 0.561 |
F12 | ENSPCOP00000020894 | ENSPCOP00000010528 | ENSPCOP00000020894 | Coagulation factor XII. | WD_REPEATS_REGION domain-containing protein. | 0.967 |
F12 | EPHB2 | ENSPCOP00000010528 | ENSPCOP00000000714 | Coagulation factor XII. | EPH receptor B2. | 0.588 |
F12 | MET | ENSPCOP00000010528 | ENSPCOP00000021885 | Coagulation factor XII. | MET proto-oncogene, receptor tyrosine kinase. | 0.967 |
F12 | MST1R | ENSPCOP00000010528 | ENSPCOP00000023347 | Coagulation factor XII. | Macrophage stimulating 1 receptor. | 0.963 |
F12 | PRSS12 | ENSPCOP00000010528 | ENSPCOP00000026941 | Coagulation factor XII. | Serine protease 12; Belongs to the peptidase S1 family. | 0.553 |
F12 | PTK7 | ENSPCOP00000010528 | ENSPCOP00000012721 | Coagulation factor XII. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.986 |
F12 | SPINT2 | ENSPCOP00000010528 | ENSPCOP00000002647 | Coagulation factor XII. | Serine peptidase inhibitor, Kunitz type 2. | 0.706 |
L1CAM | EPHB2 | ENSPCOP00000003469 | ENSPCOP00000000714 | L1 cell adhesion molecule. | EPH receptor B2. | 0.801 |
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