Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRMS1 | NMI | ENSPCOP00000018101 | ENSPCOP00000031392 | BRMS1 transcriptional repressor and anoikis regulator. | N-myc and STAT interactor. | 0.753 |
ENSPCOP00000001398 | NMI | ENSPCOP00000001398 | ENSPCOP00000031392 | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | N-myc and STAT interactor. | 0.701 |
ENSPCOP00000008901 | NMI | ENSPCOP00000008901 | ENSPCOP00000031392 | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | N-myc and STAT interactor. | 0.701 |
IFI35 | IFIH1 | ENSPCOP00000027787 | ENSPCOP00000019450 | Interferon induced protein 35. | Interferon induced with helicase C domain 1. | 0.705 |
IFI35 | NMI | ENSPCOP00000027787 | ENSPCOP00000031392 | Interferon induced protein 35. | N-myc and STAT interactor. | 0.980 |
IFI35 | STAT2 | ENSPCOP00000027787 | ENSPCOP00000010342 | Interferon induced protein 35. | Signal transducer and activator of transcription. | 0.631 |
IFI35 | UBE2L6 | ENSPCOP00000027787 | ENSPCOP00000025954 | Interferon induced protein 35. | Ubiquitin conjugating enzyme E2 L6. | 0.861 |
IFIH1 | IFI35 | ENSPCOP00000019450 | ENSPCOP00000027787 | Interferon induced with helicase C domain 1. | Interferon induced protein 35. | 0.705 |
IFIH1 | NMI | ENSPCOP00000019450 | ENSPCOP00000031392 | Interferon induced with helicase C domain 1. | N-myc and STAT interactor. | 0.777 |
IFIH1 | STAT2 | ENSPCOP00000019450 | ENSPCOP00000010342 | Interferon induced with helicase C domain 1. | Signal transducer and activator of transcription. | 0.704 |
IFIH1 | UBE2L6 | ENSPCOP00000019450 | ENSPCOP00000025954 | Interferon induced with helicase C domain 1. | Ubiquitin conjugating enzyme E2 L6. | 0.770 |
MYC | MYCN | ENSPCOP00000003643 | ENSPCOP00000005108 | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | MYCN proto-oncogene, bHLH transcription factor. | 0.807 |
MYC | NMI | ENSPCOP00000003643 | ENSPCOP00000031392 | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | N-myc and STAT interactor. | 0.621 |
MYC | STAT2 | ENSPCOP00000003643 | ENSPCOP00000010342 | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | Signal transducer and activator of transcription. | 0.664 |
MYCN | MYC | ENSPCOP00000005108 | ENSPCOP00000003643 | MYCN proto-oncogene, bHLH transcription factor. | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | 0.807 |
MYCN | NMI | ENSPCOP00000005108 | ENSPCOP00000031392 | MYCN proto-oncogene, bHLH transcription factor. | N-myc and STAT interactor. | 0.640 |
NMI | BRMS1 | ENSPCOP00000031392 | ENSPCOP00000018101 | N-myc and STAT interactor. | BRMS1 transcriptional repressor and anoikis regulator. | 0.753 |
NMI | ENSPCOP00000001398 | ENSPCOP00000031392 | ENSPCOP00000001398 | N-myc and STAT interactor. | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | 0.701 |
NMI | ENSPCOP00000008901 | ENSPCOP00000031392 | ENSPCOP00000008901 | N-myc and STAT interactor. | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | 0.701 |
NMI | IFI35 | ENSPCOP00000031392 | ENSPCOP00000027787 | N-myc and STAT interactor. | Interferon induced protein 35. | 0.980 |
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