STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM31_12805Unannotated protein. (215 aa)    
Predicted Functional Partners:
GM31_14685
Unannotated protein.
 
 0.994
GM31_17200
Unannotated protein.
 
 0.962
GM31_03225
Unannotated protein.
 
 0.936
GM31_10830
Unannotated protein.
 
 0.878
GCA_001297775_03829
Unannotated protein.
  
 0.817
GM31_00125
Unannotated protein.
   
 0.752
GCA_001297775_00636
Unannotated protein.
 
 0.750
GM31_00325
Unannotated protein.
 
 0.747
rcsC
Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
0.736
GM31_02280
Unannotated protein.
 
 
 0.700
Your Current Organism:
Trabulsiella odontotermitis
NCBI taxonomy Id: 379893
Other names: BCRC 17577, Enterobacteriaceae bacterium Eant 3-3, Enterobacteriaceae bacterium Eant 3-9, LMG 23580, LMG:23580, T. odontotermitis, Trabulsiella odontotermitis Chou et al. 2007, strain Eant 3-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.