STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001297775_00596Unannotated protein. (399 aa)    
Predicted Functional Partners:
GCA_001297775_00597
Unannotated protein.
 
     0.952
GCA_001297775_00598
Unannotated protein.
 
     0.952
GM31_00505
Unannotated protein.
    
  0.773
GCA_001297775_00599
Unannotated protein.
       0.772
GM31_13140
Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.767
tyrA
Unannotated protein.
  
    0.409
GCA_001297775_00595
Unannotated protein.
       0.406
GM31_05240
Unannotated protein.
   
    0.404
Your Current Organism:
Trabulsiella odontotermitis
NCBI taxonomy Id: 379893
Other names: BCRC 17577, Enterobacteriaceae bacterium Eant 3-3, Enterobacteriaceae bacterium Eant 3-9, LMG 23580, LMG:23580, T. odontotermitis, Trabulsiella odontotermitis Chou et al. 2007, strain Eant 3-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.