STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001297775_01650Unannotated protein. (175 aa)    
Predicted Functional Partners:
GM31_02630
Unannotated protein.
  
    0.759
GM31_02620
Unannotated protein.
  
  
 0.748
GM31_17365
Unannotated protein; Involved in formation and maintenance of cell shape.
  
  
 0.730
GM31_02615
Unannotated protein.
  
  
 0.724
GM31_05240
Unannotated protein.
 
    0.720
GM31_18630
Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.
  
  
 0.653
GM31_17355
Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.640
mutS
Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
   
 0.633
bcsA
Unannotated protein; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
    0.627
GM31_07315
Unannotated protein.
  
  
 0.574
Your Current Organism:
Trabulsiella odontotermitis
NCBI taxonomy Id: 379893
Other names: BCRC 17577, Enterobacteriaceae bacterium Eant 3-3, Enterobacteriaceae bacterium Eant 3-9, LMG 23580, LMG:23580, T. odontotermitis, Trabulsiella odontotermitis Chou et al. 2007, strain Eant 3-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.