STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001297775_02099Unannotated protein. (742 aa)    
Predicted Functional Partners:
GM31_14030
Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.967
GM31_20455
Unannotated protein.
 
  
 0.898
GM31_20450
Unannotated protein.
 
  
 0.887
GM31_20445
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.862
GM31_08510
Unannotated protein.
 
  
 0.795
GM31_22895
Unannotated protein.
 
 
0.697
GM31_01935
Unannotated protein.
 
  
 0.676
GM31_01930
Unannotated protein.
 
  
 0.627
GM31_17760
Unannotated protein.
 
  
 0.588
GM31_21290
Unannotated protein.
  
  
 0.495
Your Current Organism:
Trabulsiella odontotermitis
NCBI taxonomy Id: 379893
Other names: BCRC 17577, Enterobacteriaceae bacterium Eant 3-3, Enterobacteriaceae bacterium Eant 3-9, LMG 23580, LMG:23580, T. odontotermitis, Trabulsiella odontotermitis Chou et al. 2007, strain Eant 3-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.