Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001297775_03829 | GCA_001297775_04242 | GCA_001297775_03829 | GCA_001297775_04242 | Unannotated protein. | Unannotated protein. | 0.891 |
GCA_001297775_03829 | GM31_00125 | GCA_001297775_03829 | GCA_001297775_03547 | Unannotated protein. | Unannotated protein. | 0.967 |
GCA_001297775_03829 | GM31_02280 | GCA_001297775_03829 | GCA_001297775_03217 | Unannotated protein. | Unannotated protein. | 0.935 |
GCA_001297775_03829 | GM31_14685 | GCA_001297775_03829 | GCA_001297775_02384 | Unannotated protein. | Unannotated protein. | 0.989 |
GCA_001297775_03829 | GM31_16045 | GCA_001297775_03829 | GCA_001297775_03341 | Unannotated protein. | Unannotated protein. | 0.608 |
GCA_001297775_03829 | GM31_17200 | GCA_001297775_03829 | GCA_001297775_03060 | Unannotated protein. | Unannotated protein. | 0.995 |
GCA_001297775_03829 | rcsC | GCA_001297775_03829 | GCA_001297775_03520 | Unannotated protein. | Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.980 |
GCA_001297775_03829 | rssB | GCA_001297775_03829 | GCA_001297775_01405 | Unannotated protein. | Unannotated protein; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. | 0.979 |
GCA_001297775_04242 | GCA_001297775_03829 | GCA_001297775_04242 | GCA_001297775_03829 | Unannotated protein. | Unannotated protein. | 0.891 |
GCA_001297775_04242 | GM31_00125 | GCA_001297775_04242 | GCA_001297775_03547 | Unannotated protein. | Unannotated protein. | 0.810 |
GCA_001297775_04242 | GM31_02280 | GCA_001297775_04242 | GCA_001297775_03217 | Unannotated protein. | Unannotated protein. | 0.698 |
GCA_001297775_04242 | GM31_14685 | GCA_001297775_04242 | GCA_001297775_02384 | Unannotated protein. | Unannotated protein. | 0.977 |
GCA_001297775_04242 | GM31_16045 | GCA_001297775_04242 | GCA_001297775_03341 | Unannotated protein. | Unannotated protein. | 0.875 |
GCA_001297775_04242 | GM31_16050 | GCA_001297775_04242 | GCA_001297775_03342 | Unannotated protein. | Unannotated protein. | 0.745 |
GCA_001297775_04242 | GM31_17200 | GCA_001297775_04242 | GCA_001297775_03060 | Unannotated protein. | Unannotated protein. | 0.987 |
GCA_001297775_04242 | rcsC | GCA_001297775_04242 | GCA_001297775_03520 | Unannotated protein. | Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.452 |
GCA_001297775_04242 | rssB | GCA_001297775_04242 | GCA_001297775_01405 | Unannotated protein. | Unannotated protein; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. | 0.568 |
GM31_00125 | GCA_001297775_03829 | GCA_001297775_03547 | GCA_001297775_03829 | Unannotated protein. | Unannotated protein. | 0.967 |
GM31_00125 | GCA_001297775_04242 | GCA_001297775_03547 | GCA_001297775_04242 | Unannotated protein. | Unannotated protein. | 0.810 |
GM31_00125 | GM31_02280 | GCA_001297775_03547 | GCA_001297775_03217 | Unannotated protein. | Unannotated protein. | 0.998 |
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