E0Z10_g9665 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g9665

C2H2-type domain-containing protein. (986 aa)

Predicted Functional Partners:

E0Z10_g3486

0.779

E0Z10_g5392

0.631

E0Z10_g6107

0.617

E0Z10_g4723

0.604

E0Z10_g9337

0.596

E0Z10_g7032

0.592

E0Z10_g10749

0.585

E0Z10_g10975

0.579

E0Z10_g7578

0.579

E0Z10_g4200

0.579

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g10749	E0Z10_g6107	A0A4Z0XZV2	A0A4Z0YRN3	Uncharacterized protein.	Uncharacterized protein.	0.998
E0Z10_g10749	E0Z10_g9337	A0A4Z0XZV2	A0A4Z0YJH8	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.807
E0Z10_g10749	E0Z10_g9665	A0A4Z0XZV2	A0A4Z0YIH9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.585
E0Z10_g10975	E0Z10_g4200	A0A4Z0Y6R7	A0A4Z0YJS8	Uncharacterized protein.	Uncharacterized protein.	0.999
E0Z10_g10975	E0Z10_g7578	A0A4Z0Y6R7	A0A4Z0YAE2	Uncharacterized protein.	Uncharacterized protein.	0.999
E0Z10_g10975	E0Z10_g9665	A0A4Z0Y6R7	A0A4Z0YIH9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.579
E0Z10_g3486	E0Z10_g5392	A0A4Z0YND1	A0A4Z0Z3Z2	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	ANK_REP_REGION domain-containing protein.	0.401
E0Z10_g3486	E0Z10_g9665	A0A4Z0YND1	A0A4Z0YIH9	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	C2H2-type domain-containing protein.	0.779
E0Z10_g4200	E0Z10_g10975	A0A4Z0YJS8	A0A4Z0Y6R7	Uncharacterized protein.	Uncharacterized protein.	0.999
E0Z10_g4200	E0Z10_g7578	A0A4Z0YJS8	A0A4Z0YAE2	Uncharacterized protein.	Uncharacterized protein.	0.999
E0Z10_g4200	E0Z10_g9665	A0A4Z0YJS8	A0A4Z0YIH9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.579
E0Z10_g4723	E0Z10_g7032	A0A4Z0YJI0	A0A4Z0YWA7	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.657
E0Z10_g4723	E0Z10_g9665	A0A4Z0YJI0	A0A4Z0YIH9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.604
E0Z10_g5392	E0Z10_g3486	A0A4Z0Z3Z2	A0A4Z0YND1	ANK_REP_REGION domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.401
E0Z10_g5392	E0Z10_g9665	A0A4Z0Z3Z2	A0A4Z0YIH9	ANK_REP_REGION domain-containing protein.	C2H2-type domain-containing protein.	0.631
E0Z10_g6107	E0Z10_g10749	A0A4Z0YRN3	A0A4Z0XZV2	Uncharacterized protein.	Uncharacterized protein.	0.998
E0Z10_g6107	E0Z10_g9337	A0A4Z0YRN3	A0A4Z0YJH8	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.839
E0Z10_g6107	E0Z10_g9665	A0A4Z0YRN3	A0A4Z0YIH9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.617
E0Z10_g7032	E0Z10_g4723	A0A4Z0YWA7	A0A4Z0YJI0	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.657
E0Z10_g7032	E0Z10_g9665	A0A4Z0YWA7	A0A4Z0YIH9	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	C2H2-type domain-containing protein.	0.592