STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g9545Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
E0Z10_g5814
Uncharacterized protein.
    
 0.785
E0Z10_g3857
Small nuclear ribonucleoprotein Sm D2.
    
 0.779
E0Z10_g9430
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.777
E0Z10_g4614
Uncharacterized protein; Belongs to the GST superfamily.
    
  0.775
E0Z10_g2325
Uncharacterized protein.
    
  0.775
E0Z10_g316
Sm domain-containing protein.
    
 0.772
E0Z10_g6047
RRM domain-containing protein.
    
 0.766
E0Z10_g2815
Uncharacterized protein.
    
 0.766
E0Z10_g774
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.760
E0Z10_g2360
Small nuclear ribonucleoprotein G.
    
  0.757
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.